Asymmetric Stochastic Switching Driven by Intrinsic Molecular Noise
نویسندگان
چکیده
Low-copy-number molecules are involved in many functions in cells. The intrinsic fluctuations of these numbers can enable stochastic switching between multiple steady states, inducing phenotypic variability. Herein we present a theoretical and computational study based on Master Equations and Fokker-Planck and Langevin descriptions of stochastic switching for a genetic circuit of autoactivation. We show that in this circuit the intrinsic fluctuations arising from low-copy numbers, which are inherently state-dependent, drive asymmetric switching. These theoretical results are consistent with experimental data that have been reported for the bistable system of the gallactose signaling network in yeast. Our study unravels that intrinsic fluctuations, while not required to describe bistability, are fundamental to understand stochastic switching and the dynamical relative stability of multiple states.
منابع مشابه
Stochastic regime switching SIS epidemic model with vaccination driven by Lévy noise
*Correspondence: [email protected] School of Mathematics and Statistics, Beihua University, Jilin, 132013, China Abstract We formulate a stochastic SIS epidemic model with vaccination by introducing a Lévy noise and regime switching into the epidemic model. First, we prove that the stochastic model admits a unique global positive solution. Moreover, we study the asymptotic behavior of the sto...
متن کاملStochastic switching in biology: from genotype to phenotype
There has been a resurgence of interest in non-equilibrium stochastic processes in recent years, driven in part by the observation that the number of molecules (genes, mRNA, proteins) involved in gene expression are often of order 1–1000. This means that deterministic mass-action kinetics tends to break down, and one needs to take into account the discrete, stochastic nature of biochemical reac...
متن کاملConstructing the Energy Landscape for Genetic Switching System Driven by Intrinsic Noise
Genetic switching driven by noise is a fundamental cellular process in genetic regulatory networks. Quantitatively characterizing this switching and its fluctuation properties is a key problem in computational biology. With an autoregulatory dimer model as a specific example, we design a general methodology to quantitatively understand the metastability of gene regulatory system perturbed by in...
متن کاملPinning noise-induced stochastic resonance.
This paper proposes the concept of pinning noise and then investigates the phenomenon of stochastic resonance of coupled complex systems driven by pinning noise, where the noise has an α-stable distribution. Two kinds of pinning noise are taken into account: partial noise and switching noise. In particular, we establish a connection between switching noise and global noise when Gaussian noise i...
متن کاملAsymmetric Effects of Monetary Policy and Business Cycles in Iran using Markov-switching Models
This paper investigates the asymmetric effects of monetary policy on economic growth over business cycles in Iran. Estimating the models using the Hamilton (1989) Markov-switching model and by employing the data for 1960-2012, the results well identify two regimes characterized as expansion and recession. Moreover, the results show that an expansionary monetary policy has a positive and statist...
متن کامل